- Evo_source
- “Evo_source” column indicates that whether this record is a known precursor miRNA (pre-mir) from miRBase 13.0, an orthologous pre-mir highly similar to pre-mirs from other species or a paralogous pre-mir highly similar to pre-mirs from own species.
- Species_No
- In “Species_No” column, the value “a/b” indicates that a out of 86 (22+34+30) species are known to encode this pre-mir class and b out of 86 species are known or predicted to encode this pre-miR class.
- Distribution
- In “Distribution” column, the value “c/d” indicates that c pre-mirs in this own species belong to this pre-mir class and that d pre-mirs in all 86 (22+34+30) species belong to this pre-mir class.
Index | ID | Class | Mature miRNA (MatMiR) |
Match/ MatMiR Length |
Chrom | Strand | MatMiR Position |
PreMir Position |
Confidence | Evo_ Source |
Species_ No |
Distribution |
---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | triCas2-98 | mir-9 | tca-miR-9b | 23/23 | chrUn_91 | + | 13-35 | N/A | 0.960856 | Paralog | 41/59 | 5/206 |
2 | triCas2-97 | mir-929 | tca-miR-929 | 21/21 | chrUn_44 | - | 19-39 | N/A | 0.999942 | Paralog | 5/17 | 2/21 |
3 | triCas2-95 | mir-9 | lmi-miR-9a* | 22/23 | chrUn_11 | + | 50-72 | N/A | 0.940548 | Paralog | 41/59 | 5/206 |
4 | triCas2-90 | mir-8 | lmi-miR-8 | 22/23 | ChLG9 | - | 49-71 | N/A | 0.981159 | Paralog | 20/23 | 2/35 |
5 | triCas2-93 | mir-275 | tca-miR-275 | 23/23 | ChLG9 | - | 49-71 | N/A | 0.984066 | Paralog | 16/16 | 2/25 |
6 | triCas2-89 | mir-9 | xtr-miR-9 | 20/22 | ChLG9 | - | 15-36 | N/A | 0.967456 | Paralog | 41/59 | 5/206 |
7 | triCas2-92 | mir-305 | tca-miR-305 | 23/23 | ChLG9 | - | 15-37 | N/A | 0.999704 | Paralog | 16/19 | 2/23 |
8 | triCas2-89 | mir-9 | tca-miR-9a | 21/23 | ChLG9 | - | 15-37 | N/A | 0.977931 | Paralog | 41/59 | 5/206 |
9 | triCas2-90 | mir-8 | lmi-miR-8* | 22/22 | ChLG9 | - | 14-35 | N/A | 0.855227 | Paralog | 20/23 | 2/35 |
10 | triCas2-88 | mir-927 | tca-miR-927 | 22/22 | ChLG9 | + | 14-35 | N/A | 0.999092 | Paralog | 5/14 | 2/16 |
11 | triCas2-84 | mir-307 | tca-miR-307 | 20/20 | ChLG8 | + | 52-71 | N/A | 0.999271 | Paralog | 16/17 | 2/26 |
12 | triCas2-80 | mir-92 | mmu-miR-92a | 19/21 | ChLG8 | + | 52-71 | N/A | 0.971632 | Paralog | 47/65 | 4/170 |
13 | triCas2-80 | mir-92 | tca-miR-92a | 20/20 | ChLG8 | + | 52-71 | N/A | 0.965356 | Paralog | 47/65 | 4/170 |
14 | triCas2-80 | mir-92 | sko-miR-92a | 20/22 | ChLG8 | + | 51-71 | N/A | 0.98061 | Paralog | 47/65 | 4/170 |
15 | triCas2-80 | mir-92 | ame-miR-92a | 20/21 | ChLG8 | + | 51-71 | N/A | 0.973935 | Paralog | 47/65 | 4/170 |
16 | triCas2-80 | mir-92 | aga-miR-92a | 21/22 | ChLG8 | + | 51-72 | N/A | 0.987944 | Paralog | 47/65 | 4/170 |
17 | triCas2-84 | mir-307 | lmi-miR-307 | 23/23 | ChLG8 | + | 50-72 | N/A | 0.998125 | Paralog | 16/17 | 2/26 |
18 | triCas2-83 | mir-210 | tca-miR-210 | 19/21 | ChLG8 | + | 23-43 | N/A | 0.976032 | Paralog | 33/43 | 2/62 |
19 | triCas2-83 | mir-210 | lmi-miR-210 | 21/23 | ChLG8 | + | 22-44 | N/A | 0.966842 | Paralog | 33/43 | 2/62 |
20 | triCas2-84 | mir-307 | lmi-miR-307* | 23/23 | ChLG8 | + | 15-37 | N/A | 0.998957 | Paralog | 16/17 | 2/26 |
21 | triCas2-72 | mir-184 | xtr-miR-184 | 20/22 | ChLG7 | - | 50-69 | N/A | 0.996782 | Paralog | 40/54 | 2/73 |
22 | triCas2-72 | mir-184 | oan-miR-184 | 20/22 | ChLG7 | - | 50-70 | N/A | 0.994935 | Paralog | 40/54 | 2/73 |
23 | triCas2-77 | mir-277 | dsi-miR-277 | 21/23 | ChLG7 | - | 49-71 | N/A | 0.98813 | Paralog | 17/17 | 2/32 |
24 | triCas2-78 | mir-317 | bmo-miR-317 | 22/22 | ChLG7 | - | 49-70 | N/A | 0.999042 | Paralog | 18/19 | 2/32 |
25 | triCas2-68 | mir-281 | bmo-miR-281 | 22/22 | ChLG7 | - | 49-70 | N/A | 0.999356 | Paralog | 25/33 | 2/68 |
26 | triCas2-72 | mir-184 | tca-miR-184 | 22/22 | ChLG7 | - | 49-70 | N/A | 0.993267 | Paralog | 40/54 | 2/73 |
27 | triCas2-78 | mir-317 | aga-miR-317 | 24/25 | ChLG7 | - | 48-72 | N/A | 0.999423 | Paralog | 18/19 | 2/32 |
28 | triCas2-68 | mir-281 | bfl-miR-281 | 21/22 | ChLG7 | - | 48-68 | N/A | 0.999489 | Paralog | 25/33 | 2/68 |
29 | triCas2-68 | mir-281 | aga-miR-281 | 22/23 | ChLG7 | - | 48-70 | N/A | 0.999735 | Paralog | 25/33 | 2/68 |
30 | triCas2-68 | mir-281 | lmi-miR-281 | 22/23 | ChLG7 | - | 48-69 | N/A | 0.999734 | Paralog | 25/33 | 2/68 |
31 | triCas2-72 | mir-184 | bmo-miR-184 | 24/24 | ChLG7 | - | 48-71 | N/A | 0.984996 | Paralog | 40/54 | 2/73 |
32 | triCas2-68 | mir-281 | sko-miR-281 | 20/22 | ChLG7 | - | 48-67 | N/A | 0.999426 | Paralog | 25/33 | 2/68 |
33 | triCas2-68 | mir-281 | tca-miR-281* | 22/22 | ChLG7 | - | 19-40 | N/A | 0.998108 | Paralog | 25/33 | 2/68 |
34 | triCas2-75 | mir-34 | spu-miR-34 | 20/22 | ChLG7 | - | 17-37 | N/A | 0.980036 | Paralog | 45/67 | 2/144 |
35 | triCas2-75 | mir-34 | ame-miR-34 | 21/22 | ChLG7 | - | 16-37 | N/A | 0.985437 | Paralog | 45/67 | 2/144 |
36 | triCas2-75 | mir-34 | lgi-miR-34 | 22/23 | ChLG7 | - | 16-38 | N/A | 0.992098 | Paralog | 45/67 | 2/144 |
37 | triCas2-75 | mir-34 | dme-miR-34 | 24/24 | ChLG7 | - | 16-39 | N/A | 0.986068 | Paralog | 45/67 | 2/144 |
38 | triCas2-75 | mir-34 | aga-miR-34 | 20/20 | ChLG7 | - | 15-34 | N/A | 0.988526 | Paralog | 45/67 | 2/144 |
39 | triCas2-66 | mir-190 | dme-miR-190 | 24/24 | ChLG7 | - | 15-38 | N/A | 0.988058 | Paralog | 24/55 | 2/95 |
40 | triCas2-66 | mir-190 | tca-miR-190 | 25/25 | ChLG7 | - | 15-39 | N/A | 0.988077 | Paralog | 24/55 | 2/95 |
41 | triCas2-66 | mir-190 | bmo-miR-190 | 23/23 | ChLG7 | - | 14-36 | N/A | 0.988676 | Paralog | 24/55 | 2/95 |
42 | triCas2-66 | mir-190 | lgi-miR-190 | 21/22 | ChLG7 | - | 14-35 | N/A | 0.989442 | Paralog | 24/55 | 2/95 |
43 | triCas2-63 | mir-137 | bfl-miR-137 | 20/22 | ChLG7 | + | 52-71 | N/A | 0.999919 | Paralog | 24/47 | 2/69 |
44 | triCas2-63 | mir-137 | tca-miR-137 | 22/22 | ChLG7 | + | 51-72 | N/A | 0.999935 | Paralog | 24/47 | 2/69 |
45 | triCas2-61 | mir-92 | tca-miR-92a | 18/20 | ChLG7 | + | 51-69 | N/A | 0.803247 | Paralog | 47/65 | 4/170 |
46 | triCas2-63 | mir-137 | dme-miR-137 | 22/22 | ChLG7 | + | 51-72 | N/A | 0.999856 | Paralog | 24/47 | 2/69 |
47 | triCas2-63 | mir-137 | cfa-miR-137 | 19/21 | ChLG7 | + | 51-71 | N/A | 0.999918 | Paralog | 24/47 | 2/69 |
48 | triCas2-63 | mir-137 | lgi-miR-137 | 21/22 | ChLG7 | + | 51-71 | N/A | 0.999901 | Paralog | 24/47 | 2/69 |
49 | triCas2-63 | mir-137 | mmu-miR-137 | 21/23 | ChLG7 | + | 50-72 | N/A | 0.999875 | Paralog | 24/47 | 2/69 |
50 | triCas2-61 | mir-92 | mmu-miR-92a | 19/21 | ChLG7 | + | 50-70 | N/A | 0.841762 | Paralog | 47/65 | 4/170 |
51 | triCas2-65 | mir-282 | tca-miR-282 | 24/24 | ChLG7 | + | 15-38 | N/A | 0.99642 | Paralog | 16/16 | 2/28 |
52 | triCas2-62 | mir-7 | cap-miR-7 | 23/24 | ChLG7 | + | 13-36 | N/A | 0.986437 | Paralog | 46/63 | 2/143 |
53 | triCas2-62 | mir-7 | tca-miR-7 | 23/23 | ChLG7 | + | 13-35 | N/A | 0.984885 | Paralog | 46/63 | 2/143 |
54 | triCas2-60 | mir-125 | bfl-miR-125b-as | 22/22 | ChLG6 | - | 49-70 | N/A | 0.993035 | Paralog | 45/62 | 2/195 |
55 | triCas2-56 | mir-87 | cbr-miR-87 | 19/20 | ChLG6 | + | 52-71 | N/A | 0.998819 | Paralog | 21/27 | 3/39 |
56 | triCas2-54 | mir-87 | dme-miR-87 | 19/21 | ChLG6 | + | 52-71 | N/A | 0.999785 | Paralog | 21/27 | 3/39 |
57 | triCas2-54 | mir-87 | sme-miR-87a | 18/20 | ChLG6 | + | 52-70 | N/A | 0.999887 | Paralog | 21/27 | 3/39 |
58 | triCas2-54 | mir-87 | bmo-miR-87 | 20/21 | ChLG6 | + | 51-71 | N/A | 0.999844 | Paralog | 21/27 | 3/39 |
59 | triCas2-56 | mir-87 | bmo-miR-87 | 19/21 | ChLG6 | + | 51-71 | N/A | 0.999451 | Paralog | 21/27 | 3/39 |
60 | triCas2-59 | let-7 | hsa-let-7a-2* | 20/22 | ChLG6 | + | 51-72 | N/A | 0.979968 | Paralog | 44/65 | 2/337 |
61 | triCas2-54 | mir-87 | tca-miR-87 | 21/21 | ChLG6 | + | 51-71 | N/A | 0.999584 | Paralog | 21/27 | 3/39 |
62 | triCas2-56 | mir-87 | aga-miR-87 | 20/21 | ChLG6 | + | 51-71 | N/A | 0.997943 | Paralog | 21/27 | 3/39 |
63 | triCas2-54 | mir-87 | cbr-miR-87 | 20/20 | ChLG6 | + | 51-70 | N/A | 0.999785 | Paralog | 21/27 | 3/39 |
64 | triCas2-56 | mir-87 | tca-miR-87 | 20/21 | ChLG6 | + | 50-70 | N/A | 0.998136 | Paralog | 21/27 | 3/39 |
65 | triCas2-54 | mir-87 | aga-miR-87 | 19/21 | ChLG6 | + | 50-70 | N/A | 0.999584 | Paralog | 21/27 | 3/39 |
66 | triCas2-58 | mir-100 | nve-miR-100 | 21/22 | ChLG6 | + | 18-38 | N/A | 0.99957 | Paralog | 39/56 | 2/88 |
67 | triCas2-58 | mir-100 | cap-miR-100 | 20/22 | ChLG6 | + | 17-38 | N/A | 0.999792 | Paralog | 39/56 | 2/88 |
68 | triCas2-58 | mir-100 | mdo-miR-100 | 21/21 | ChLG6 | + | 17-37 | N/A | 0.999882 | Paralog | 39/56 | 2/88 |
69 | triCas2-59 | let-7 | spu-let-7 | 20/22 | ChLG6 | + | 7-27 | N/A | 0.996635 | Paralog | 44/65 | 2/337 |
70 | triCas2-44 | mir-133 | sme-miR-133 | 18/20 | ChLG5 | - | 51-69 | N/A | 0.989738 | Paralog | 47/64 | 2/138 |
71 | triCas2-44 | mir-133 | ppy-miR-133a | 19/21 | ChLG5 | - | 51-69 | N/A | 0.98776 | Paralog | 47/64 | 2/138 |
72 | triCas2-48 | mir-1 | cel-miR-1 | 19/21 | ChLG5 | - | 51-69 | N/A | 0.997953 | Paralog | 41/61 | 2/166 |
73 | triCas2-44 | mir-133 | bfl-miR-133 | 21/22 | ChLG5 | - | 50-70 | N/A | 0.99155 | Paralog | 47/64 | 2/138 |
74 | triCas2-44 | mir-133 | cin-miR-133 | 21/21 | ChLG5 | - | 50-70 | N/A | 0.991871 | Paralog | 47/64 | 2/138 |
75 | triCas2-44 | mir-133 | tca-miR-133 | 22/22 | ChLG5 | - | 49-70 | N/A | 0.995962 | Paralog | 47/64 | 2/138 |
76 | triCas2-44 | mir-133 | spu-miR-133 | 22/23 | ChLG5 | - | 49-71 | N/A | 0.997783 | Paralog | 47/64 | 2/138 |
77 | triCas2-44 | mir-133 | mmu-miR-133a | 22/22 | ChLG5 | - | 49-70 | N/A | 0.996067 | Paralog | 47/64 | 2/138 |
78 | triCas2-48 | mir-1 | cap-miR-1 | 21/22 | ChLG5 | - | 23-44 | N/A | 0.801972 | Paralog | 41/61 | 2/166 |
79 | triCas2-50 | mir-31 | tca-miR-31a | 22/22 | ChLG5 | - | 18-39 | N/A | 0.990212 | Paralog | 40/60 | 2/107 |
80 | triCas2-53 | mir-932 | tca-miR-932 | 22/22 | ChLG5 | - | 15-36 | N/A | 0.999585 | Paralog | 4/13 | 2/14 |
81 | triCas2-42 | mir-965 | aga-miR-965 | 21/22 | ChLG5 | + | 51-72 | N/A | 0.997995 | Paralog | 4/6 | 2/10 |
82 | triCas2-37 | mir-33 | spu-miR-33 | 21/22 | ChLG4 | - | 21-42 | N/A | 0.993511 | Paralog | 34/54 | 2/96 |
83 | triCas2-37 | mir-33 | hsa-miR-33a | 21/21 | ChLG4 | - | 19-39 | N/A | 0.991918 | Paralog | 34/54 | 2/96 |
84 | triCas2-37 | mir-33 | gga-miR-33 | 20/20 | ChLG4 | - | 19-38 | N/A | 0.983554 | Paralog | 34/54 | 2/96 |
85 | triCas2-37 | mir-33 | tca-miR-33 | 19/19 | ChLG4 | - | 18-36 | N/A | 0.990149 | Paralog | 34/54 | 2/96 |
86 | triCas2-37 | mir-33 | dme-miR-33 | 20/21 | ChLG4 | - | 15-35 | N/A | 0.987574 | Paralog | 34/54 | 2/96 |
87 | triCas2-33 | mir-981 | aga-miR-981 | 20/20 | ChLG4 | + | 52-71 | N/A | 0.994244 | Paralog | 6/13 | 2/16 |
88 | triCas2-33 | mir-981 | lgi-miR-981 | 21/23 | ChLG4 | + | 50-70 | N/A | 0.989469 | Paralog | 6/13 | 2/16 |
89 | triCas2-33 | mir-981 | ame-miR-981 | 21/22 | ChLG4 | + | 50-71 | N/A | 0.993939 | Paralog | 6/13 | 2/16 |
90 | triCas2-26 | mir-276 | tca-miR-276 | 22/22 | ChLG3 | - | 49-70 | N/A | 0.999789 | Paralog | 17/17 | 2/53 |
91 | triCas2-28 | bantam | bmo-bantam | 22/23 | ChLG3 | - | 49-71 | N/A | 0.999267 | Paralog | 20/22 | 2/30 |
92 | triCas2-31 | mir-283 | tca-miR-283 | 20/20 | ChLG3 | - | 20-39 | N/A | 0.999794 | Paralog | 16/17 | 2/23 |
93 | triCas2-29 | mir-12 | bmo-miR-12 | 22/23 | ChLG3 | - | 16-38 | N/A | 0.99702 | Paralog | 18/18 | 2/28 |
94 | triCas2-29 | mir-12 | cap-miR-12 | 21/22 | ChLG3 | - | 15-35 | N/A | 0.997238 | Paralog | 18/18 | 2/28 |
95 | triCas2-26 | mir-276 | tca-miR-276* | 20/20 | ChLG3 | - | 15-34 | N/A | 0.99947 | Paralog | 17/17 | 2/53 |
96 | triCas2-26 | mir-276 | aga-miR-276-5p | 20/20 | ChLG3 | - | 14-33 | N/A | 0.99982 | Paralog | 17/17 | 2/53 |
97 | triCas2-26 | mir-276 | dme-miR-276* | 22/23 | ChLG3 | - | 14-35 | N/A | 0.999397 | Paralog | 17/17 | 2/53 |
98 | triCas2-26 | mir-276 | dgr-miR-276b* | 23/23 | ChLG3 | - | 13-35 | N/A | 0.999691 | Paralog | 17/17 | 2/53 |
99 | triCas2-15 | mir-13 | bmo-miR-13a | 19/21 | ChLG3 | + | 52-70 | N/A | 0.999059 | Paralog | 17/18 | 3/75 |
100 | triCas2-14 | mir-2 | tca-miR-2 | 23/23 | ChLG3 | + | 50-72 | N/A | 0.999712 | Paralog | 20/21 | 6/116 |
101 | triCas2-17 | mir-2 | tca-miR-2 | 23/23 | ChLG3 | + | 50-72 | N/A | 0.997706 | Paralog | 20/21 | 6/116 |
102 | triCas2-18 | mir-2 | tca-miR-2 | 23/23 | ChLG3 | + | 50-72 | N/A | 0.999571 | Paralog | 20/21 | 6/116 |
103 | triCas2-20 | mir-14 | tca-miR-14 | 21/21 | ChLG3 | + | 50-70 | N/A | 0.938325 | Paralog | 16/16 | 2/29 |
104 | triCas2-15 | mir-13 | tca-miR-13a | 22/22 | ChLG3 | + | 50-71 | N/A | 0.997945 | Paralog | 17/18 | 3/75 |
105 | triCas2-15 | mir-13 | ame-miR-13a | 20/21 | ChLG3 | + | 50-70 | N/A | 0.99888 | Paralog | 17/18 | 3/75 |
106 | triCas2-23 | mir-219 | spu-miR-219 | 22/23 | ChLG3 | + | 15-37 | N/A | 0.999414 | Paralog | 38/52 | 2/89 |
107 | triCas2-23 | mir-219 | dre-miR-219 | 22/22 | ChLG3 | + | 14-35 | N/A | 0.999411 | Paralog | 38/52 | 2/89 |
108 | triCas2-23 | mir-219 | hsa-miR-219-5p | 21/21 | ChLG3 | + | 14-34 | N/A | 0.999281 | Paralog | 38/52 | 2/89 |
109 | triCas2-21 | mir-263 | bmo-miR-263a | 19/21 | ChLG3 | + | 13-31 | N/A | 0.987145 | Paralog | 16/26 | 3/53 |
110 | triCas2-23 | mir-219 | odi-miR-219 | 19/21 | ChLG3 | + | 12-30 | N/A | 0.999415 | Paralog | 38/52 | 2/89 |
111 | triCas2-11 | mir-71 | lgi-miR-71 | 22/23 | ChLG3 | + | 11-33 | N/A | 0.990701 | Paralog | 13/17 | 2/25 |
112 | triCas2-21 | mir-263 | tca-miR-263b | 20/20 | ChLG3 | + | 11-30 | N/A | 0.992359 | Paralog | 16/26 | 3/53 |
113 | triCas2-21 | mir-263 | ame-miR-263b | 21/21 | ChLG3 | + | 10-30 | N/A | 0.986466 | Paralog | 16/26 | 3/53 |
114 | triCas2-11 | mir-71 | spu-miR-71 | 22/23 | ChLG3 | + | 10-31 | N/A | 0.993162 | Paralog | 13/17 | 2/25 |
115 | triCas2-11 | mir-71 | cel-miR-71 | 19/19 | ChLG3 | + | 9-27 | N/A | 0.987958 | Paralog | 13/17 | 2/25 |
116 | triCas2-9 | mir-iab-4 | tca-miR-iab-4-3p | 24/24 | ChLG2 | - | 43-66 | N/A | 0.998953 | Paralog | 16/16 | 3/44 |
117 | triCas2-9 | mir-iab-4 | tca-miR-iab-4-5p | 22/22 | ChLG2 | - | 19-40 | N/A | 0.999732 | Paralog | 16/16 | 3/44 |
118 | triCas2-7 | mir-970 | bmo-miR-970 | 19/21 | ChLG2 | + | 52-70 | N/A | 0.998119 | Paralog | 4/4 | 2/5 |
119 | triCas2-5 | mir-10 | lmi-miR-10* | 22/22 | ChLG2 | + | 50-71 | N/A | 0.999904 | Paralog | 43/59 | 2/124 |
120 | triCas2-7 | mir-970 | tca-miR-970 | 21/21 | ChLG2 | + | 50-70 | N/A | 0.99934 | Paralog | 4/4 | 2/5 |
121 | triCas2-5 | mir-10 | spu-miR-10 | 21/23 | ChLG2 | + | 16-36 | N/A | 0.999735 | Paralog | 43/59 | 2/124 |
122 | triCas2-5 | mir-10 | cap-miR-10a | 20/22 | ChLG2 | + | 13-34 | N/A | 0.9998 | Paralog | 43/59 | 2/124 |
123 | triCas2-4 | mir-iab-4 | dme-miR-iab-4as-5p | 23/23 | ChLG2 | + | 13-35 | N/A | 0.999898 | Paralog | 16/16 | 3/44 |
124 | triCas2-3 | mir-1000 | ame-miR-1000 | 20/21 | ChLG1X | + | 15-35 | N/A | 0.999928 | Paralog | 4/6 | 2/9 |
Total | 124 record(s). |